D4.4 Initial version of the ProCAncer-I platform

Feb 4, 2022 | Deliverables

This document outlines the initial version ProCAncer-I Platform’s architecture and describes its various storage implementations, services and tools, AI models’ framework, and monitoring and logging systems. At the current point of project’s development, a lot of emphasis is given to the upload of the retrospective data and its constituents processes: the data preparation in accordance with the ethical and security related requirements (anonymization), the annotation and curation using domain specific tools and metadata standards, and their efficient storage management to support scalable retrieval of structured information. In more detail, this document focuses on the following aspects of the architecture:

  • The data upload process from the end user’s point of view and the eCRF application. We briefly describe the selected “use cases”, i.e., the patient case classification to answer the clinical questions that are the primary focus of the project;
  • The data annotation and curation tools that are used for imaging related tasks like segmentation, motion correction, and co-registration;
  • The core data management components, i.e., the DICOM Image Repository and the Metadata Repository, and their crucial role in the data upload process;
  • The security related services to support users and services authentication and authorization and their integration with the ELIXIR federated identity infrastructure for cross-organization single sign-on.

Furthermore, this document provides the initial design for the ProCAncer-I Machine Learning/AI framework that will allow the deployment of state-of-the-art model development approaches (“MLops”) supporting the whole model lifecycle: from model building and tuning with “experiment tracking”, to model deployment and serving, and to monitoring of the “real world” performance and the alerting mechanisms to address challenges such as data and concept drifts.

The whole infrastructure is currently deployed on a commercial cloud but in a “cloud agnostic” way to avoid vendor lock-in problems and facilitate porting to a “cloud native” but provider independent solution in the future version

Highlights

ProCAncer-I at the IEEE BHI-BSN 2022 in Ioannina

ProCAncer-I at the IEEE BHI-BSN 2022 in Ioannina

The ProCAncer-I together with the other AI4HI funded projects organised a workshop with the title “Developing open, standard-based, interoperable Cancer Imaging Repositories in Europe: Issues, Experiences and Challenges” within the IEEE BHI-BHS Conference in Ioannina...

ProCAncer-I at the European Researchers Night in Turin

ProCAncer-I at the European Researchers Night in Turin

The European Researchers' Night is a Europe-wide public event, which displays the diversity of science and its impact on citizens' daily lives. On Saturday, 1st of October 2022, ProCAncer-I was present at the European Researchers Night in Turin. Our researchers...

🇪🇺ProCAncer_I was present at the #EuropeanResearchersNight in #Turin to promote the project and get closer to the public: both patients and researchers were involved and learned how #artificialintelligence could help to fight #cancer!
#AI #H2020 https://aipocratech.com/

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"The Commission also commits to supporting research on cancer screening, strengthening cooperation between EU Member States and overcoming legal and technical barriers to data sharing to support screening" https://uroweb.org/news/life-changing-recommendations-by-european-commission-for-men-impacted-by-prostate-cancer

@EuCanImage together with other AI4HI projects organised a workshop within the IEEE BHI-BHS Conference today in Ioannina. What a great way to showcase AI4HI network initiative & advances. @chaimeleon_eu @IncisiveEu @primage_project @ProCAncer_I

24th of September is celebrated as World Cancer Research Day. #Cancer research has had major impact on improving cancer survival rates and better quality of life of patients. Bravo to our researchers!
#worldcancerresearchday #cancerresearch #wcrd2022 #healthcare #HealthIT #H2020

📢 Job Alert!
#Candiolo_Cancer_Institute is currently looking for a Radiologist and a Research Assistant!
Read more here 👉 https://www.procancer-i.eu/get-involved/job-openings/
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#JobAlert #radiologist #researchassistan #research #sciencecareers #careers #H2020 #HorizonEU #EU_HEALTH

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